Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTHIAWASACLLLVMLTGFFTIGQ-----QTYKIEKLKDKNEVLSEKIKE-----LNHIESTSSASENKAFFEAFFNYSDIDIRYETVKKHTTGKGFDYAFPSRSDQKHTVSVQSELLSL-ESYSKPLDESHELFLNIVEVATTANSVTTNQVLIVQTTMKKEKDGWLVDNV--------QVKGNG------------------------------
3KYS Chain:A ((3-218))-----SIGTTKLRLVEFSAFLEQQRDPDSYNKHLFVHIGHLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFFLVKF-WADLNCNIQD---AGAFYGVTSQYESS--ENMTVTCSTKVCSFGKQVVEKVETEYARFENGRFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVFEVSNSEHGAQHHIYRLVK


General information:
TITO was launched using:
RESULT:

Template: 3KYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 584 -41482 -71.03 -264.21
target 2D structure prediction score : 0.18
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -71.03
2D Compatibility (Sec. Struct. Predict.) : 0.18
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.044

(partial model without unconserved sides chains):
PDB file : Tito_3KYS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KYS-query.scw
PDB file : Tito_Scwrl_3KYS.pdb: