Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------MKASVIIPAYNSKERLYNSLLSLNQQECDEEFEVIVADNGSEDGTLSMLESFQADFP---LIFTRIKENRGIAYGRNQALRNARGDILIFHDSDMLA-AKDLVAKHIKAHENEENLVVCGLFWKRIYSFYYERFEEEHKEQLAKLTGEMPKKDKQKLLEEADIKNGSFLDKSFDLDTDFIDVLKKILDEYGDDLKGYHMPWRFFITNNSSVKRKHVVDLGLFDEGIVRYGFEDYDLGIRLHQAGLTFRLRRDIVSVHQEHPSNCKSVDDIRANIAYMCDKYNNIRSLDVHLAFNGPFPPDMTNRIMADIQKLLESQKYDMLLNLFLELLHVVKERNIDPDWRKKSPRVTAKSFDLQTVRKLLPKAKKKLGVNDFANALYALVNDLLHVDLRSLDVV
3CKJ Chain:A ((15-329))GLRDTRPGDTWLADRSWNRPGWTVAELEAAKAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPGRVTELVARPLLAALRPELGCILQPLGGEYAATRELLTSVPFAPG----YGVEIGLLVDTFDRLG---------------------------------------------LDAIAQVNLGVREHRN--------------------------------------------RPLAELGAMSRQVIATLLSRCGIPDSGVGLTQFVADGPEGQSYTQHTWPVSLAD--------RPPMQAIRPR----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1424 -100008 -70.23 -380.26
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -70.23
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_3CKJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CKJ-query.scw
PDB file : Tito_Scwrl_3CKJ.pdb: