Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETPETRFCKESKVVKTSRVF--PLDTNNHNTLFGGKLMSYIDDIASISAARHCRRETVTASMDSVDFLKPIGQKDSVCLESYVTWVGTSSMEVFVKVIKEHLMT---GERELAATSFLTFVALDSNGKPVPVPRVVPETEEEIMLHNTAVQRANERKNRKRHSQALANALGTDKPW
3BJK Chain:E ((12-135))-----------SKGVLLLRTLAMPSDTNANGDIFGGWIMSQMAMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPR------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3BJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 596 -77801 -130.54 -653.79
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain E : 0.73

3D Compatibility (PKB) : -130.54
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_3BJK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BJK-query.scw
PDB file : Tito_Scwrl_3BJK.pdb: