Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLSQIYPQAQHPYSFELNKDMHISAAHFIPRESAG-ACSRVHGHTYTVNITVAGDELDDSGFLVNFSVLKKLVHGNY---DHTLLNDHEDFSQDDRYSLPTTEVVAKTIYDNVQAYLDTLENKPTCVQVFVRETPTSYCVYRPKKGGLNG
3QNA Chain:C ((23-139))-------------STTLFKDFTFEAAHRLPHVPEGHKAGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLEN------PTSEVLAKWIWDQVKPVV------PLLSAVMVKETCTAGCIYR--------


General information:
TITO was launched using:
RESULT:

Template: 3QNA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 464 -76431 -164.72 -676.38
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.78

3D Compatibility (PKB) : -164.72
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.633

(partial model without unconserved sides chains):
PDB file : Tito_3QNA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QNA-query.scw
PDB file : Tito_Scwrl_3QNA.pdb: