Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKIIVQKFGGTSVKDDKGRKLALGHIKEAISEGYKVVVVVSAMGRKGDPYATDSLLGLLYGDQSAISP----REQDLLLSCGETISSVVFTSMLLDNGVKAAALTGAQAGFLTNDQHTNAKIIEMKPERLFSVLANHDAVVVAGFQGATEKGDTTTIGRGGSDTSAAALGAAVDAEYIDIFTDVEGVMTADPRVVENAKPLPVVTYTEICNLAYQGAKVISPRAVEIAMQAKVPIRVRSTYSNDKGTLVTSHHSSKVGSDVFERLITGIAHVKD---VTQFKVPAKIGQYNVQTEVFKAMANAGISVDF-----FNIT--PSEIVYTVAGNKTETAQRILMDMG---------YDPMVTRNCAKVSAVGAGIMGVPGVTSKIVSALSEKEIPILQSADSHTTIWVLVHEADMVPAVNALHEVFELSK 3AB4 Chain:C ((2-407)) -ALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGD-----TTDELLEL----AAAVNPVPPAREMDMLLTAGERISNALVAMAIESLGAEAQSFT--------------------TPGRVREALDEGKICIVA----------------GGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMED---IPVEEAVLTGVATDKSEAKVTVLGISDKPGE---AAKVFRALADAEINIDMVLQNV----DGTTDITFTCPRSDGRRAMEILKKLQVQGNWTNVLYDDQV----GKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQL--

General information: TITO was launched using: RESULT: Template: 3AB4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1803 -247313 -137.17 -723.14 target 2D structure prediction score : 0.69 Monomeric hydrophicity matching model chain C : 0.76 3D Compatibility (PKB) : -137.17 2D Compatibility (Sec. Struct. Predict.) : 0.69 1D Compatibility (Hydrophobicity) : 0.76 QMean score : 0.515

(partial model without unconserved sides chains): PDB file : Tito_3AB4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3AB4-query.scw PDB file : Tito_Scwrl_3AB4.pdb: