Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRYLTAGESHGPQLTTIIEGVPAGLYITEEDINFELARRQKGHGRGRRMQIEKDQAKIMSGVRHARTLGSPIALVVENNDW-KHWTKIMGAAPITEDEEKEMKRQISRPRPGHADLNGAIKYNHRDMRN-VLERSSARETTVRVAAGAVAKKILSE-LGIKVAGHVLQIGAVKAEKTEYTSIEDLQRVTEESPVRCYDEEAGKKMMAAIDEAKANGDSIGGIVEVIVEGMPVGVGSYVHY-DRKLDSKLAAAVLSINAFKGVEFGIGFEAAGRNGSEVHDEIIWDEEKGYTRATNRLGGLEGGMTTGMPIVVRGVMKPIPTLYKPLKSVDIETKEPFSASIERSDSCAVPAASVVAEAAVAWEIANAVVEQFGLDQIDRIRENVENMRKLSREF
4OB9 Chain:A ((10-354))FRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRKEPDQVEIISGVFEGKTTGTPIGLLIRNTDQK----------------------------------------------GGG--RSSARETAMRVAAGAIAKKYLAEKFGVLIRGHVTQIGNEVAE-KL------DWNEVPNNPFFCGDVDAVPRFEALVTSLREQGTSCGAKLEILAEKVPVGWG--EPVFD-RLDADIAHAMMSINAVKGVEIGDGFAVAGQFGHETRDELTSH-----GFLANHAGGILGGISSGQTIRVAIALKPTA--------------------KGRHDPCVGVRATPIAEAMLAIVLMDHFLRHRAQNADV----------------


General information:
TITO was launched using:
RESULT:

Template: 4OB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1504 -32349 -21.51 -111.16
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -21.51
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_4OB9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OB9-query.scw
PDB file : Tito_Scwrl_4OB9.pdb: