Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVFVARQPIFNRKEQVVAYELLYRESEENVYSAKDGDQATTDLVINSFLNIGIEKLTEGKRCFVNFTESLMFSNLPTSFNPKQLVIEILEDIPITPALISRCKELKKMGYMLALDDFYAINPQDEDLLEKLMSYIDILKIDFLKTTRMERRTILQTYGCRGLIFLAEKVETRKEYKQAVQDGFQLFQGYFFSEPRIISGHDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQILKFLNSSHSRLSQKIESIQQAIMLLGFNEIKRWIYILSFKDL-SRKG-HSSKHEIIKISLIRAKLCELLARKTSRPQPASYMLIGMFSLIDTLLHREI-----------------------------------EEIVQELPLKDEVGQALLGHQND---------YYQMLELVKLIESNNWDTCSELGNQLDKEEAYECYLEALEWCHNLMDAK
3HC1 Chain:A ((23-242))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLTARVVHLANSPLYSAARPISSIRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEYCT------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3HC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 692 -87700 -126.73 -504.02
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -126.73
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_3HC1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HC1-query.scw
PDB file : Tito_Scwrl_3HC1.pdb: