Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATIKDVAGAAGVSVATVSRNLNDNGYVHEETRTRVIAAMAKLNYYPNEVARSLYKRESRLIGLLLPDITNPFFPQLARGAEDELNREGYRLIFGNSDEELKKELEYLQTFKQNHVAGII---AATNYPDLEEYSGMNYPVVFLDRTLEGA---PSVSSDGYTGVKLAAQAIIHGKSQRITLLRGPAHLPTAQ-DRFNGALEILKQAEV---DFQVIETASFSIKDAQSMAKELFASYPATDGVIASNDIQAAAVLHEALRRGKNVPEDIQIIGYDDIPQSGLLFPPLSTIKQPAYDMGKEAAKLLLGIIKKQPLAETAIQMPVTYIGRKTTRKED
1ZVV Chain:G ((3-332))-VTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIE---YRPNAVARGLASKKTTTVGVIIPDISNIFYAELARGIEDIASMYKYNIILSNSDQNQDKQLHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVV-LAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPVRDSYIVE-GDYTYDSGIEAVEKLLEEDEKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSSIVELPHRIEFRQSTK---


General information:
TITO was launched using:
RESULT:

Template: 1ZVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 1637 -3952 -2.41 -12.47
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain G : 0.78

3D Compatibility (PKB) : -2.41
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_1ZVV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZVV-query.scw
PDB file : Tito_Scwrl_1ZVV.pdb: