Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQ-LTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV |
1G1J Chain:A ((1-43)) | -----------------IEKQMDRVVKEMRRQLEMIDKLTTREIEQVELLKRIYDKLTVQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 699 for 152 contacts (4.6/contact) +
2D Compatibility (PS) -4448 + (NN) -1400 + (LL) 20304
1D Compatibility (HY) -2000 + (ID) 300
Total energy: 12855.0 ( 84.57 by residue)
QMean score : 0.121
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