Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAQPRPAAPNPKRNVKAIRTVRFWMAPIATTLALMSALAALYLGGILNPMTNLRHFPIALVNEDAGPAGQQIVDGLVSGLDKNKFDIRVVSPDEARRLLDTAAVYGSALIPPTFSSQLRDFGASAVTPTRTDRPAITISTNPRAGTLAASIAGQTLTRA---LTVVNGKVGERLTAEVAAQTGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAF----YYALLLLL----AGFTGSIVVSTLVDSMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLALLTSGVYLAIAHGLGMPIPLGWQVWLYGVFAIIAVGVTSSSLIAVLGSMGLLVSMLIFVILGLPSAGATVPLEAVPAFFRWLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIGLIIGLLLGGFITHLYDRSSFHRIPGAVEMAIAVEHQAQYQARQSARESSSEQP |
| 1BXV Chain:A ((1-91)) | --------------------------------------------------------------------------------------------------------------QTVAIKMGAD--NGMLAFEP-----STIEIQA---GDTVQWVNNKLA----PHNVVVE---G-----------------------QPELSHK--DLAFSP----GETFEATFSEPGTYTYYCE-PHRGAGMVGKIVVQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45258 for 525 contacts (-86.2/contact) +
2D Compatibility (PS) -8352 + (NN) -1028 + (LL) 27956
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -28732.0 ( -54.73 by residue)
QMean score : -0.038
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