Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTAAHGYTQQKDN-YAKRLRR-----------VEGQVRGIARMIEEDKYCIDVLTQISAVTSALRSVALN-----LLDEHLSHCVTRAVAEGGPGADGKLAEASAAIARLVRS----------- |
| 5I62 Chain:A ((1-534)) | GQVAPNVWSKYFNIPNPGLRAYFSNVVSGQPEVYRTPFYKGMSLESICDEWYKKLVSIDTQWPTLMEFEDDLRKKVGPMSVMLPLKERMSDIDSYYDSISKDQVPFDTKAISAAKSEWKGVSRLRLRSEVNTVAVMKKSTNSGSPYFSKRKAVVSKTIPCDVYMDGRYCVMRQNGREWSGAAVLGWRGQEGGPKPTDVKQRVVWMFPFAVNIRELQVYQPLILTFQRLGLVPAWVSMEAVDRRITKMFDTKGPRDVVVCTDFSKFDQHFNPTCQSVAKELLADLLTGQEAVDWLERVFPIKYAIPLAYNWGEIRYGIHGMGSGSGGTNADETLVHRVLQHEAAISHHTTLNPNSQCLGDDGVLTYPGISAEDVMQSYSRHGLDMNLEKQYVSKQDCTYLRRWHHTDYRVDGMCVGVYSTMRALGRLAMQERYYDPDVWGEKMVTLRYLSIIENVKYHPLKEEFLDFCIKGDKTRLGLGIPGFLDNIAGEAQKGIENWWVVQALKSRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 5I62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4424 for 509 contacts (-8.7/contact) +
2D Compatibility (PS) -9895 + (NN) 533 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -19236.0 ( -37.79 by residue)
QMean score : 0.354
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