Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIR-AASDD--PAGVDELVAAIAPGLAGLGLPVINRREVVLVTG----PWLAGVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVV-------SAATALTESDCV-------LLDTAAEHTDAVVAVVSKIDVH---RG-WR----DVLTS----NRDRLAARASRYARVP-------------------WVGAA-AAPELGEPYLDDL---------VAAIQKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRR-ARVDALRQQRRTVLRQGRQSKSEHTIALRAQ-IQHARVKLSYFARNRCSLLRVEL-QEHVAGLSRKDIARFAAYTRGRVQEVVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGAGF---GLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGEVTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAARAAALRDREM---PAVRAALEAVRAELGEPGAPTTGLF--- |
| 3VWA Chain:A ((5-544)) | PLHMSISNFQFPYTIEETAITETALWQCFDGTRKADSLPVTVFKAKRSPENESLILNAVHKSKILKIPGLCTVLETFDSDPQSTFIVTERVVPFPWDNLGSLSQNKFGVELGISQLLATLGFLKNFVLGTLSKDSVFINIKGEWVLFGLELCSSKEGLSAFEFASRARSYYNIIGSQLPCEDPNTIDSMGLGLLIKSLMAPSCLPKDWIVNVNMISDGKITIENFRKRLENTETWRSNPLINFYQELRELHIK---DPQGKLVVMSNLENLYLESREIFRN-----------LTPGMIEN------FIIPELCEIIKL-LMTQSISSNASHKLVPFLAIVLDLTSET-NTFPVGFNDLITQSFKLPDRQVRFLLLIYLPKLIG-----PLSKSEISSRIYPHFIQGLTDSDATLRLQTLKTIPCIVSCLTERQLNNELLRFLAKTQ--------VDSDVEIRTWTVIIISKISTILSTSVGNRSNILATAFTKSLKDPQVKPRLAALYGLEKSIELFDVNTIANKILTVIAPGLLDKSPIVRGRAKILFEEYLEKLEKEAQLIQTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52347 for 3174 contacts (-16.5/contact) +
2D Compatibility (PS) -46815 + (NN) -9193 + (LL) 2896
1D Compatibility (HY) 9200 + (ID) 1400
Total energy: -97659.0 ( -30.77 by residue)
QMean score : 0.179
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