Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDRRAYSCWPVPGGDIALMAARAA-------RGGVMLRQVSA---LDRMKAIVAQAVLDHVTDEEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEV-FGAGGYPQMLLRVGWAPINADPLPPTPRRELSQVVEWPEELLRQRC |
3GB5 Chain:A ((52-253)) | ----------------------------------------------------------------------------------------------------------MRSQEFYELLNKRRSVR-FISSEHVPMEVIENVIKAAGTAPSGAHTEPWTFVVVKDPDMKHKIREIIEEEEEI-----------------------------------------------------KEYLDTAPVLILIFKQV---YNEISVSIACGLLLAALQNAGLVTVTTTPLNC----GPRLRVLLGRPSHEKLLVLLPVGYPSRDA-TVPDLKRKALDQIMVTV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71531 for 1086 contacts (-65.9/contact) +
2D Compatibility (PS) -17335 + (NN) -15241 + (LL) 9292
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -101715.0 ( -93.66 by residue)
QMean score : 0.305
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