Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAPLRIALIGAGNMGRQHYHRLQRIA--GARLCAVADPQG---QAFAADTGVP-WFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSELVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTALWQLKKPDSYFEVAWRREPGAGMLLTNLIHDLDLLRHLCGE--VREVQALAGNAIRGLPNEDNIALLLRFANGALGSLTGCDAAAAPWSWELAAGENPVYPRQAEQPCYLLAGTEGALSLPQLR-----RWRYAEARQGWHDPLAASEEAVATGDPLQRQLEHFVRVARGEEA--PLMDATDAARTLALVEAVREAARSGRACAPASF |
| 3OHS Chain:X ((2-332)) | ---ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEFGKNLTHVPRAVDWA--QAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHET--GVDDTVTVLLQYPGEVHGSFTCSITAQL-------------------SNTASVSGTKGMAQLLNPCWCPTELVVKGE-HKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADILEEVRRAIGVTFPQD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189597 for 2754 contacts (-68.8/contact) +
2D Compatibility (PS) -33669 + (NN) -13414 + (LL) 1772
1D Compatibility (HY) -12400 + (ID) 3650
Total energy: -250958.0 ( -91.12 by residue)
QMean score : 0.466
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