Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQFFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVD-RIRRIRQLDDKHNFTLVCRDLSELGVYA--K-VDTGLFRLLKAHTPGPYTFILSATREVPRMLLHPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSGEPLNDPYEMRQVLEHQVDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQPA
1HRU Chain:A ((3-188))
---------NNLQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAV-MRLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTG-RFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGL-PPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRDALTGELFR---------------
General information:
TITO was launched using:
RESULT:
Template:
1HRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152404 for 1443 contacts (-105.6/contact) +
2D Compatibility (PS) -19816 + (NN) -13838 + (LL) 864
1D Compatibility (HY) -8800 + (ID) 2150
Total energy: -196144.0 ( -135.93 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1HRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HRU-query.scw
PDB file :
Tito_Scwrl_1HRU.pdb
: