Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
4IB6 Chain:A ((1-162))
----------------LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENDECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENS----QSLVCQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
General information:
TITO was launched using:
RESULT:
Template:
4IB6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111356 for 1184 contacts (-94.1/contact) +
2D Compatibility (PS) -15993 + (NN) 4902 + (LL) 2052
1D Compatibility (HY) -24000 + (ID) 7800
Total energy: -152195.0 ( -128.54 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_4IB6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IB6-query.scw
PDB file :
Tito_Scwrl_4IB6.pdb
: