Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
3D97 Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELIETMTADDVVCTKVYVRE
General information:
TITO was launched using:
RESULT:
Template:
3D97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35562 for 931 contacts (-38.2/contact) +
2D Compatibility (PS) -15177 + (NN) -6502 + (LL) 208
1D Compatibility (HY) -15600 + (ID) 5100
Total energy: -77733.0 ( -83.49 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3D97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D97-query.scw
PDB file :
Tito_Scwrl_3D97.pdb
: