Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDPFAVKDGLLILE
3UWB Chain:A ((3-150))
----------------LKIKTIGDRCLRQKSEEVE-FDKKEMSELYDQMCEAMWAS------------DGIGLAAPQVGINKRVIVVDETTEEHG--KY------AHLMVNPKITWKSEEKV--LFDEGCLSVP-DQNGEVLRPKSIKVTFQNKDGKYKKWKLDGLAARVVQHEIDHLEGILFVDYFN---------------
General information:
TITO was launched using:
RESULT:
Template:
3UWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43148 for 1144 contacts (-37.7/contact) +
2D Compatibility (PS) -15740 + (NN) -3845 + (LL) 4940
1D Compatibility (HY) -8800 + (ID) 2850
Total energy: -69443.0 ( -60.70 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_3UWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWB-query.scw
PDB file :
Tito_Scwrl_3UWB.pdb
: