Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL
2ZI6 Chain:C ((39-279))
-------------------RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWS----------------KNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLN------EKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQF---LELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114635 for 1679 contacts (-68.3/contact) +
2D Compatibility (PS) -22738 + (NN) -5821 + (LL) 1536
1D Compatibility (HY) -32000 + (ID) 10150
Total energy: -183808.0 ( -109.47 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI6-query.scw
PDB file :
Tito_Scwrl_2ZI6.pdb
: