Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------MAEPDPSHPLETQAGKV------QEAQDSDSDSEGGAAGGEADMDFLRNLFSQTLSLGSQKERLLDELTLEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQS---------------------------LVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGWKKELEDLVRREHASIDAQSGAGVPNPSTSASPKKSPPPAKDEARTTEREKPQ |
| 4IAO Chain:A ((29-485)) | SMSNDVLKPETPKGPIIISSNGIFYGPSFTKRESLNARMFLKYYGAHKFLDTYLPEDLNSLYIYYLIKLLGFEVKDQALIGTINSIVDPLAKKQTVRLIKDLQRAINKVLCTRLRLSNFFTIDHFIQKLHT--ARKILVLTGAGVSTSLGIPDFRS-SEGFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLPPEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVT--CHWNLPGERIFNKIRNLELPLCPYCYKKRREYFPEGYNNKSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKHAEF---------------------DLSLLGYCDDIAAMVAQKCGWT---------------------IPHKKWNDLKNKNFKSQEKDKGVYVVTS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138990 for 2625 contacts (-52.9/contact) +
2D Compatibility (PS) -35671 + (NN) -15575 + (LL) 2396
1D Compatibility (HY) -26400 + (ID) 5200
Total energy: -219440.0 ( -83.60 by residue)
QMean score : 0.459
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