Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGANLEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFRPLFRWQLCPGWPVLAQLAVGSALFS-IVVPVLAPGL---GSTRSSALCSLGYCVWYGSAFAQALLLGCHA-------SLGHRLGAGQVPGLTLGLTVGIWGVAALLTLPVTLASGAS----GGLCTLIYSTEL-KALQATHTVACLAIFVLLPLGLFGA---KGLKKA-------------------LGMGPGPWMNILWAWFIFWWPHGVVLGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWSSHLDTLGSKS |
| 2KS9 Chain:A ((33-325)) | ----------------------------------------------------------VLWAAAYTVIVVTSVVGNVVVMWIILAH--KRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLY-------LKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248697 for 1916 contacts (-129.8/contact) +
2D Compatibility (PS) -25808 + (NN) -4062 + (LL) 2688
1D Compatibility (HY) -18000 + (ID) 1600
Total energy: -295479.0 ( -154.22 by residue)
QMean score : 0.314
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