Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSASNITLTHPTAFLLVGIPGLEHLHIWISIPFCLAYTLALLGNCTLLLIIQADAALHEPMYLFLAMLAAIDLVLSSSALPKMLAIFWFRDREINFFACLAQMFFLHSFSIMESAVLLAMAFDRYVAICKPLHYTKVLTGSLITKIGMAAVARAVTLMTPLPFLLRCFHYCRGPVIAHCYCEHMAVVRLACGDTSFNNIYGIAVAMFIVVLDLLLVILSYIFILQAVLLLASQ--------EARYKAFGTCVSHIGAILAFYTTVVISSVMHRVARH-AAPHVHILLANFYLLFPPMVNPIIYGVKTKQIRESILGVFPRKDM |
| 1U19 Chain:A ((41-326)) | --------------------------SMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMALACAAPPLVGWSRYIP----EGMQCSCGIDYYTP---HEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -293659 for 2226 contacts (-131.9/contact) +
2D Compatibility (PS) -28079 + (NN) -3957 + (LL) 2136
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -330309.0 ( -148.39 by residue)
QMean score : 0.242
|
|
|