Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATSNHSSGAEFILAGLTQRPELQLPLFLLFLGIYVVTVVGNLGMIFLIALSSQLYPPVYYFLSHLSFIDLCYSSVITPKMLVNFVPEENIISFLECITQLYFFLIFVIAEGYLLTAMEYDRYVAICRPLLYNIVMSHRVCSIMMAVVYSLGFLWATVHTTRMSVLSFCRSHTVSHYFCDILPLLTLSCSSTHINEILLFIIGGVNTLATTLAVLISYAFIFSSILGIHS-----------TEGQSKAFGTCSSHLLAVGIFFGSITFMYFKPPSSTT------MEKEKVSSVFYITIIPMLNPLIYSLRNKDVKNALKKMTRGRQSS
2KS9 Chain:A ((33-324))------------------------VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTT-----ETMPSRVVCMIEWPEHP---NKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFI


General information:
TITO was launched using:
RESULT:

Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -265714 for 2171 contacts (-122.4/contact) +
2D Compatibility (PS) -27587 + (NN) -3211 + (LL) 2388
1D Compatibility (HY) -23200 + (ID) 2500
Total energy: -319824.0 ( -147.32 by residue)
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_2KS9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KS9-query.scw
PDB file : Tito_Scwrl_2KS9.pdb: