Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKNNLTRVTEFILMGFMDHPKLEIPLFLVFLSFYLVTLLGNVGMIMLIQVDVKLYTPMYFFLSHLSLLDACYTSVITPQILATLATGKTVISYGHCAAQFFLFTICAGTECFLLAVMAYDRYAAIRNPLLYTVAMNPRLCWSLVVGAYVCGVSGAILRTTCTFTLSFCKDNQINFFFCDLPPLLKLACSDTANIEIVIIFFGNFVILANASVILISYLLIIKTILKVKS-----------SGGRAKTFSTCASHITAVALFFGALIFMYLQSGSGKS------LEEDKVVSVFYTVVIPMLNPLIYSLRNKDVKDAFRKVARRLQVSLSM
2KS9 Chain:A ((33-324))------------------------VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTT-----ETMPSRVVCMIEWPEHP---NKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAG


General information:
TITO was launched using:
RESULT:

Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -252271 for 2171 contacts (-116.2/contact) +
2D Compatibility (PS) -27644 + (NN) -4315 + (LL) 2916
1D Compatibility (HY) -20400 + (ID) 2000
Total energy: -303714.0 ( -139.90 by residue)
QMean score : 0.293

(partial model without unconserved sides chains):
PDB file : Tito_2KS9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KS9-query.scw
PDB file : Tito_Scwrl_2KS9.pdb: