Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATVNTDATDKDISKFKVTFTLVVSGIECITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVYNQNSVYILFKVITVFLNHSNLWFAAWLKVFYCLRIANFNHPLFFLMKRKIIVLMPWLLRLSVLVSLSFSFPLSRDVFNVYVNSSIPIPSSNSTEKKYFSETNMVNLVFFYNMGIFVPLIMFILAATLLILSLKRHTLHMGSNATGSRDPSMKAHIGAIKAT-------SYFLILYIFNAIALFLSTSNIFDTYSSWNILCKIIMAAYPAGHSVQLILGNPGLRRAWKRFQHQVPLYLKGQTL |
3G65 Chain:C ((1-279)) | -MKFRAKIVD------GACLNHFTRISNMIAKLAKTCTLRI-------------SPDKLNFILCDGGVSMWCELEQENFFN-EFQMEGENNEIYLELT---------------SENLSRALKTAQNARALKIKLTNK----------HFPCLTVSVELL-SMSSSSRIVTHDIPIKVIPRKLWKDLQEPVVPD----PDVSIYLPV-LKTMKSVVEKMKNISNHLVIEANLDGELNLKIETELVCVTTHFKDLGNPPMAEVHIDIRKLLQFLAGQQV------------------NPTKALCNIVNNKMVHFDLLHEDVSLQYFIPAL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231414 for 1884 contacts (-122.8/contact) +
2D Compatibility (PS) -26431 + (NN) -1504 + (LL) 7460
1D Compatibility (HY) -10000 + (ID) 1550
Total energy: -263439.0 ( -139.83 by residue)
QMean score : 0.167
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