Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHTLYPTPFALYPINISAAWHLGPLPVSCF-VSNKYQCSLAFGATTGLRVLVVVVPQTQLSFLSSLCLVSLFLHSLVSAHGEKPTKPVGLDPTLFQVVVGILGNFSLLYYYMFLYFRGYKPRSTDLILRHLTVADSLVILSKRIPETMATFGLKHFDNYFGCKFLLYAHRVGRGVSIGSTCLLSVFQVITINPRNSRWAEMKVKAPTYIGLSNILCWAFHMLVNAIFPIYTTGKWSNNNITKKGDLGYCSAPLSDEVTKSVYAALTSFHDVLCLGLMLWASSSIVLVLYRHKQQVQHICRNNLYPNSSPGNRAIQSILALVSTFALCYALSFITYVYLALFDNSSWWLVNTAALIIACFPTISPFVLMCRDPSRSRLCSICCRRNRRFFHDFRKM |
| 1Z9H Chain:A ((13-286)) | LQLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITY--YPAMKAVNDQGKEVTEFGNKYWLMLNEKEAQQVYSGKEARTEEMKWRQWADDWLVHLISPNVYR--TPTEALASFDYIVREG-----------KFGAVEGAVAKYMGAAAMYLISKRLKSRHR---------------------------------------LQDNVREDLYEAADKWVAAVGK-------------------------DRPFMGGQKPN-------LADLAVYGVLRVMEG-LDAFDDLMQHTH----------------IQPWYLRVERAITEA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218709 for 2212 contacts (-98.9/contact) +
2D Compatibility (PS) -28472 + (NN) -3115 + (LL) 9840
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -248256.0 ( -112.23 by residue)
QMean score : 0.230
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