Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDDAAVLKRRGYLLGINLGEGSYAKVKSAYSERLKFNVAIKIIDRKKAPADFLEKFLPREIEILAMLNHCSIIKTYEIFE-TSHGKVYIVMELAVQGDLLELIKTRGALHEDEARKKFHQLSLAIKYCHDLDVVHRDLKCDNLLL---DKDFNIKLSDFSFSKRCLRDDSGRMALSKTFCGSPAYAAPEVLQGIPYQPKVYDIWSLGVILYIMVCGSMPYDDSNIKKMLRIQKEHRVNF--PRSKHLTGECKDLIYHMLQPDVNRRLHIDEILSHCWMQPKARGSPSVAINKEGESSRGTEPLWTPEPGSDKKSATKLEPEGEAQPQAQPETKPEGTAMQMSRQSEILGFPSKPSTMETEEGPPQQPPETRAQ
2JAM Chain:A ((8-265))--------RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI--KKS-------SLENEIAVLKKIKHENIVTLEDIYESTTH--YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMS---TACGTPGYVAPEVLAQKPYS-KAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI-----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -155119 for 1795 contacts (-86.4/contact) +
2D Compatibility (PS) -25965 + (NN) -8201 + (LL) 4436
1D Compatibility (HY) -20800 + (ID) 4650
Total energy: -210299.0 ( -117.16 by residue)
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_2JAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAM-query.scw
PDB file : Tito_Scwrl_2JAM.pdb: