Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-------NYELYEKL---ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPRRKGSQITQQSTNQSRNPATTNQTEFERVF |
1V0P Chain:B ((2-284)) | ----------------EKYHGLEKIGEGTYGVVYKAQNN-YGETFALK-----------PSTTIREISILKELKHSNIVKLYDVIHT-----------LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-----------------LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKG-------------LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172462 for 1893 contacts (-91.1/contact) +
2D Compatibility (PS) -25871 + (NN) -6849 + (LL) 6868
1D Compatibility (HY) -28800 + (ID) 5700
Total energy: -232814.0 ( -122.99 by residue)
QMean score : 0.499
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