Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSCVKLWPSGAPAPLVSIEELENQELVGKGGFGTVFRAQHRKWGYDVAVKIVNSKAIS--------REVKAMASLDNEFVLRLEGV-IEKVNWDQDPKPALVTKFMENGSLSGLLQS---QCPRPWPL--LCRLLKEVVLGMFYLHDQNPVLLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSGTGSGEPGGTLGY--LAPELFVNVNRKASTASDVYSFGILMWAVLA-GREVELPTEPSLVYEAVC--NRQNRPSLAELPQAGPETPGLEGLKELMQLCWSSEPKDRPSFQECLPKTDEVFQMVENNMNAAVSTVKDFLSQLRSSNRRFSIPESGQGGTEMDGFRRTIENQHSRNDVMVSEWLNKLNLEEPPSSVPKKCPSLTKRSRAQEEQVPQAWTAGTSSDSMAQPPQTPETSTFRNQMPSPTSTGTPSPGPRGNQGAERQGMNWSCRTPEPNPVTGRPLVNIYNCSGVQVGDNNYLTMQQTTALPTWGLAPSGKGRGLQHPPPVGSQEGPKDPEAWSRPQGWYNHSGK |
| 3QUP Chain:A ((30-289)) | -------------------------MLGKGEFGSVREAQL----VKVAVKML------SSDIEEFLREAACMKEFDHPHVAKLVGVSLRS-------IPMVILPFMKHGDLHAFLLASRI--PFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGL--------------LPVKWLALESLADNLY-------TVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP---------PEC--MEEVYDLMYQCWSADPKQRPSFT-CLRMELENILGH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134939 for 1511 contacts (-89.3/contact) +
2D Compatibility (PS) -21763 + (NN) -15516 + (LL) 10004
1D Compatibility (HY) -23600 + (ID) 4100
Total energy: -189914.0 ( -125.69 by residue)
QMean score : 0.412
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