Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDAAVLKRRGYLLGINLGEGSYAKVKSAYSERLKFNVAIKIIDRKKAPADFLEKFLPREIEILAMLNHCSIIKTYEIFETSHGKVYIVMELAVQGDLLELIKTRGALHEDEARKKFHQLSLAIKYCHDLDVVHRDLKCDNLLLDKDFNIKLSDFSFSK-----RCLRDDSGRMALSKTFCGSPAYAAPEVLQGIPYQPKVYDIWSLGVILYIMVCGSMPYDDSNIKKMLRIQKEHRVNFPRSKHLTGECKDLIYHMLQPDVNRRLHIDEILSHCWMQPKARGSPSVAINKEGESSRGTEPLWTPEPGSDKKSATKLEPEGEAQPQAQPETKPEGTAMQMSRQSEILGFPSKPSTMETEEGPPQQPPETRAQ
3AQV Chain:A ((13-266))-----------YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP-TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL----------------PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP--EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPE------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3AQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170971 for 1871 contacts (-91.4/contact) +
2D Compatibility (PS) -26024 + (NN) -8900 + (LL) 3848
1D Compatibility (HY) -24400 + (ID) 4750
Total energy: -231197.0 ( -123.57 by residue)
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_3AQV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AQV-query.scw
PDB file : Tito_Scwrl_3AQV.pdb: