Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------------------------------------------------------------ATCSPTQLT-PCAPAIIGNAAPSAACCGKLKAHPASCLCKYKKDPNLQRYVNSPNGKKVFAACKLRLPRC
1ELK Chain:A ((1-153))
SDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSPDLTGV---VTIYEDLRRKGLEFPM-
General information:
TITO was launched using:
RESULT:
Template:
1ELK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6548 for 396 contacts (-16.5/contact) +
2D Compatibility (PS) -6719 + (NN) -3541 + (LL) 140
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -19918.0 ( -50.30 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1ELK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ELK-query.scw
PDB file :
Tito_Scwrl_1ELK.pdb
: