Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--ATACDAAQLTPCAGAIIGSSPPTAACCSRLREQQPCLCTYARDP-KLQRY--------VSSPNGKNAMAACKVPVPSC------------------------
1U78 Chain:A ((2-104))
PRGSALSDTERAQ-LDVMKLLNVSLHEMSRKISRSRHCIRVYLKDPVSYGTSKRAPRRKALSVRDERNVIRAASNSCKTARDIRNELQLSASKRTILNVIKRSG
General information:
TITO was launched using:
RESULT:
Template:
1U78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18433 for 359 contacts (-51.3/contact) +
2D Compatibility (PS) -6930 + (NN) -2142 + (LL) 56
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -29049.0 ( -80.92 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_1U78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U78-query.scw
PDB file :
Tito_Scwrl_1U78.pdb
: