Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCDAGKLIVCAAAIIGGAEPSASCCTNLK---AQRGCLCKYASNPAYSGYINSPTTRKTLASCGIPIP---TCPQ-
1HYP Chain:? ((6-80))
PSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGILNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14527 for 423 contacts (-34.3/contact) +
2D Compatibility (PS) -6776 + (NN) 441 + (LL) -28
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -27290.0 ( -64.52 by residue)
QMean score : 0.183
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: