Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-QCDPEQLSACVSPIFYGTAPSESCCSNLR---AQQKEGCLCQYAKDPTYASYVNNTNARKTIAA-CGIPIP---SC---
1HYP Chain:? ((6-80))
PSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26390 for 389 contacts (-67.8/contact) +
2D Compatibility (PS) -6783 + (NN) -3219 + (LL) 172
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -42170.0 ( -108.41 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: