Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
CNINANHLEKCRPAVI----GDNPPS----PIKECCELLQAANLKCICRFKS-----V---LP--------VL-A--VY----PSKVQALLSKCGLTTIP--PACQALRN
1B1U Chain:A ((13-117))
---PHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFCLSL--
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30576 for 451 contacts (-67.8/contact) +
2D Compatibility (PS) -7502 + (NN) -2896 + (LL) 200
1D Compatibility (HY) -800 + (ID) 1100
Total energy: -42674.0 ( -94.62 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: