Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KDECGATPPDQEALKLVPCVAAGKDPD------S---KPSDRCCAAVKEIGERSPACLCAVLLSK---IVRR------------VG----V-K-PEVAITIPKRCDLTDRPIGYKCGDYTMPSLQLKD
1B1U Chain:A ((16-110))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25301 for 408 contacts (-62.0/contact) +
2D Compatibility (PS) -6628 + (NN) -2181 + (LL) 828
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -36332.0 ( -89.05 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: