Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DLRKGCYDLGI-TVLMGCPDSIDKK---L--PAPP--TPS-------EGCCTLVRTI--GMKCVCEIVNKKIEDTID-----------MQKLVNVAAACGRPLAPGSQCGSYRVPGA
1W2Q Chain:A ((15-112))
----SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR---------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25610 for 405 contacts (-63.2/contact) +
2D Compatibility (PS) -7350 + (NN) -3685 + (LL) 436
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -40109.0 ( -99.03 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: