Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----QTECVSKIVPCFRFLN----TTTKPS---TDCCNSIKEAMEKDFSCLCTIY--------NTPGLLAQFNITTDQAL--GLNLRCGVNTDLSACSGTLILQ---DLRPLQL
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33011 for 487 contacts (-67.8/contact) +
2D Compatibility (PS) -8473 + (NN) 1916 + (LL) 552
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -41716.0 ( -85.66 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: