Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HPCGRTFLSALIQLVPCRPSVA----PFSTLP----PNGLCCAAIKTLGQPCLCVLAKG--------PPI---------VG--VD----RTLALHLPGKCSANFLPCN
1B1U Chain:A ((11-108))
-------AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41778 for 397 contacts (-105.2/contact) +
2D Compatibility (PS) -6719 + (NN) -1215 + (LL) -92
1D Compatibility (HY) 800 + (ID) 550
Total energy: -49554.0 ( -124.82 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: