Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KMVTYPNGDRHCVMAQGQVISACLQQANGLPHADCCYAINDVNRYVETIYGRLALCKCFQEILKDSR------------------------FTKLIGMPEKCAIPNAVPFDPKTDCDRFVEHIWLKMF
1B1U Chain:A ((41-109))
-------------------------------KARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH--------------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30192 for 247 contacts (-122.2/contact) +
2D Compatibility (PS) -4387 + (NN) 251 + (LL) 3928
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -33500.0 ( -135.63 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: