Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVTPCVAYGLGRA-PIAPCCRALNDLRFVNTRNLRRAACRCLVGVVNRNPGLRRNPRFQNIPRDCRNTFVRPFWWRPRIQCGRIN
1L6H Chain:A ((1-69))
-AGC--NAGQLTVCTGAIAGGARPTAACCSSLRA----------QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTCH------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41346 for 518 contacts (-79.8/contact) +
2D Compatibility (PS) -6936 + (NN) -4107 + (LL) 1752
1D Compatibility (HY) 800 + (ID) 750
Total energy: -50587.0 ( -97.66 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: