Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASPTCDTVQNILAPCAGFLTGQEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELTKSI---AYDPKRMPLLSTKCGVKPDFPAVDKNLDCSKLPV
3VBZ Chain:A ((82-108))
-----------------------------------------TQCEVFVCACDLAAAKCLAQEDYNPAH----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3VBZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58 for 76 contacts (-0.8/contact) +
2D Compatibility (PS) -2509 + (NN) -1611 + (LL) 2472
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -3656.0 ( -48.11 by residue)
QMean score : 0.110
(partial model without unconserved sides chains):
PDB file :
Tito_3VBZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VBZ-query.scw
PDB file :
Tito_Scwrl_3VBZ.pdb
: