Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGAVTSDLSPCLTYLTG---GP---G------------PSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITK----LN-----TNNAAALPGKCGVNIPYKISTTTNCNTVKF
1W2Q Chain:A ((22-114))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30990 for 400 contacts (-77.5/contact) +
2D Compatibility (PS) -6391 + (NN) -443 + (LL) 1628
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -38796.0 ( -96.99 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: