Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADDDAVLLCNMTRGGLEACKPSVRSGSS--DPAAD----PSKECCAALAGADLPCLCSYRHSFLLPS--------------L-G--ID----PDLALQLPAKCNLTATPGC
1B1U Chain:A ((10-108))
--------MAIPHNPLDSCRWYVSTRTCGVGP-RLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26634 for 478 contacts (-55.7/contact) +
2D Compatibility (PS) -7442 + (NN) -1307 + (LL) 492
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -39241.0 ( -82.09 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: