Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------QTCNPGQLSPCLGAIMSSTPP-----STTCCSKLKEQKPCLCGYLKDPSLK-----QFVSSPGARKVASDCGVPYPSC------------------------------------------------------ |
| 1KNG Chain:A ((50-193)) | RPAPQTALPPLEGLQADNVQVPGLDPAAFKG-KVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10409 for 357 contacts (-29.2/contact) +
2D Compatibility (PS) -6870 + (NN) 682 + (LL) 52
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -19495.0 ( -54.61 by residue)
QMean score : 0.243
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