Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------------------------------------AGECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVK---KLGQNPSCLCAVMLSNTAKMSGADPQIAVTIPKRCNIATRPVGYKCGPYTLP
1D2Z Chain:B ((1-150))
LSSKYSRNTELRRVEDNDIYRLAKILDENSCWRKLMSIIPKGMDVQACSGAGCLNFPAEIKKGFKYTAQDVFQIDEAANRLPPDQSKSQMMIDEWKTSGKLNERPTVGVLLQLLVQAELFSAADFVALDFLNE-STPARPVDGPGALISLE
General information:
TITO was launched using:
RESULT:
Template:
1D2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4595 for 458 contacts (-10.0/contact) +
2D Compatibility (PS) -9645 + (NN) -3457 + (LL) 56
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -22141.0 ( -48.34 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1D2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D2Z-query.scw
PDB file :
Tito_Scwrl_1D2Z.pdb
: