Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRASADRVALRMAPCISAADDP------QST---PTSSCCSAVHTIGQSPSCLCAVMLSGTA---R--A---------A-G----I-K-PEVAITIPKRCNMADRPVGYKCGDYTLP
1B1U Chain:A ((16-110))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38315 for 412 contacts (-93.0/contact) +
2D Compatibility (PS) -6311 + (NN) 1124 + (LL) 776
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -45626.0 ( -110.74 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: