Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTTTPDKEAFKLAPCASAAQDEN------A---SVSSQCCAKVKRIEQNPACLCAVMLS---NTAKS------------SG----I-D-PEIAMTIPKRCNIADRPVGYKCGAYTLP
1B1U Chain:A ((16-110))
---------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27325 for 396 contacts (-69.0/contact) +
2D Compatibility (PS) -6719 + (NN) -3064 + (LL) 824
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -40034.0 ( -101.10 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: