Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRSTTPDMEAFKLAPCASAAQDT---TS----------PVSSQCCAQVKKMGQNPPCLCAVMLSNTAK------SS-G----VQPENAITIPKRCNIANRPVGYKCGAYTLP
2LVF Chain:A ((17-101))
---------------MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM--DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS--------------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12637 for 345 contacts (-36.6/contact) +
2D Compatibility (PS) -6249 + (NN) 257 + (LL) 720
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -21159.0 ( -61.33 by residue)
QMean score : 0.117
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: