Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QISTSCTASMISSFTPCLNFITGSTSN---GS---------SPTQGCCGAVKSLMSGSMDCACLIITA---NVP----FQ-LPI--NRTLALGLPRACNMGGVPVQCKGGN
1SM7 Chain:A ((14-106))
------------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-IGTCPF--
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48739 for 458 contacts (-106.4/contact) +
2D Compatibility (PS) -7172 + (NN) -568 + (LL) 876
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -59553.0 ( -130.03 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: